Analysis of Ligand-Protein Contacts in PDB entry:
5VYB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5VYB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BMA
B
1 12BETA-D-MANNOPYRANOSE
lig 2
MAN
B
2 11ALPHA-D-MANNOPYRANOSE
lig 3
MAN
B
3 11ALPHA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
CA
A
308 1CALCIUM ION
lig 9
CA
A
309 1CALCIUM ION
lig 10
NA
A
310 1SODIUM ION
lig 11
PEG
A
311 7DI(HYDROXYETHYL)ETHER