Analysis of Ligand-Protein Contacts in PDB entry:
5VYG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5VYG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BGC
D
1 11BETA-D-GLUCOPYRANOSE
lig 2
XYS
D
2 9ALPHA-D-XYLOPYRANOSE
lig 3
XYS
D
3 9ALPHA-D-XYLOPYRANOSE
lig 4
BGC
E
1 11BETA-D-GLUCOPYRANOSE
lig 5
XYS
E
2 9ALPHA-D-XYLOPYRANOSE
lig 6
XYS
E
3 9ALPHA-D-XYLOPYRANOSE
lig 7
BGC
F
1 11BETA-D-GLUCOPYRANOSE
lig 8
XYS
F
2 9ALPHA-D-XYLOPYRANOSE
lig 9
XYS
F
3 9ALPHA-D-XYLOPYRANOSE
lig 10
CA
B
102 1CALCIUM ION
lig 11
CA
B
103 1CALCIUM ION
lig 12
CA
C
102 1CALCIUM ION