Analysis of Ligand-Protein Contacts in PDB entry:
5VYP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 44 ligands in PDB entry 5VYP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PIO
A
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 2
SO4
A
102 5SULFATE ION
lig 3
SO4
A
103 5SULFATE ION
lig 4
PIO
B
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 5
PIO
C
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 6
GOL
C
102 6GLYCEROL
lig 7
PIO
D
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 8
SO4
D
102 5SULFATE ION
lig 9
PIO
E
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 10
PIO
F
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 11
PIO
G
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 12
SO4
G
102 5SULFATE ION
lig 13
PIO
H
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 14
PIO
I
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 15
GOL
I
102 6GLYCEROL
lig 16
PIO
J
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 17
PIO
K
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 18
PIO
L
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 19
PIO
M
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 20
GOL
M
102 6GLYCEROL
lig 21
GOL
M
103 6GLYCEROL
lig 22
PIO
N
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 23
PIO
O
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 24
PIO
P
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 25
GOL
P
102 6GLYCEROL
lig 26
PIO
Q
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 27
GOL
Q
102 6GLYCEROL
lig 28
PIO
R
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 29
SO4
R
102 5SULFATE ION
lig 30
PIO
S
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 31
GOL
S
102 6GLYCEROL
lig 32
PIO
T
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 33
GOL
T
102 6GLYCEROL
lig 34
PIO
U
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 35
SO4
U
102 5SULFATE ION
lig 36
SO4
U
103 5SULFATE ION
lig 37
SO4
U
104 5SULFATE ION
lig 38
GOL
U
105 6GLYCEROL
lig 39
GOL
U
106 6GLYCEROL
lig 40
PIO
V
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 41
PIO
W
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 42
GOL
W
102 6GLYCEROL
lig 43
GOL
W
103 6GLYCEROL
lig 44
PIO
X
101 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE