Analysis of Ligand-Protein Contacts in PDB entry:
5VYT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5VYT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FON
A
301 22 L-GLUTAMIC ACID
lig 2
GDP
A
302 24GUANOSINE-5'-DIPHOSPHATE
lig 3
FON
B
301 22 L-GLUTAMIC ACID
lig 4
GDP
B
302 24GUANOSINE-5'-DIPHOSPHATE
lig 5
FON
C
301 22 L-GLUTAMIC ACID
lig 6
GDP
C
302 24GUANOSINE-5'-DIPHOSPHATE
lig 7
CL
C
303 1CHLORIDE ION
lig 8
CL
C
304 1CHLORIDE ION
lig 9
FON
D
301 26 L-GLUTAMIC ACID
lig 10
GDP
D
302 28GUANOSINE-5'-DIPHOSPHATE