Analysis of Ligand-Protein Contacts in PDB entry:
5WDJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 5WDJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSO
B
150 7S-HYDROXYCYSTEINE
lig 2
CSO
E
150 7S-HYDROXYCYSTEINE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
C
2 11BETA-D-MANNOPYRANOSE
lig 5
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 9
AEY
A
201 18 AMINE
lig 10
CL
A
202 1CHLORIDE ION
lig 11
HEM
A
203 43PROTOPORPHYRIN IX CONTAINING FE
lig 12
CA
A
204 1CALCIUM ION
lig 13
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
FUC
B
602 10ALPHA-L-FUCOPYRANOSE
lig 15
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
MAN
B
605 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
B
606 11ALPHA-D-MANNOPYRANOSE
lig 19
CL
B
607 1CHLORIDE ION
lig 20
HEM
D
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 21
CL
D
202 1CHLORIDE ION
lig 22
CA
D
203 1CALCIUM ION
lig 23
MAN
E
604 11ALPHA-D-MANNOPYRANOSE
lig 24
FUC
E
608 10ALPHA-L-FUCOPYRANOSE
lig 25
NAG
E
609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
E
610 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
AEY
E
611 18 AMINE
lig 28
CL
E
612 1CHLORIDE ION