Analysis of Ligand-Protein Contacts in PDB entry:
5WHU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 75 ligands in PDB entry 5WHU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
K
1 12BETA-D-GALACTOPYRANOSE
lig 2
SIA
K
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
GLC
L
1 12ALPHA-D-GLUCOPYRANOSE
lig 4
GAL
L
2 11BETA-D-GALACTOPYRANOSE
lig 5
SIA
L
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 6
GLC
M
1 12ALPHA-D-GLUCOPYRANOSE
lig 7
GAL
M
2 11BETA-D-GALACTOPYRANOSE
lig 8
SIA
M
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 9
GAL
N
1 12BETA-D-GALACTOPYRANOSE
lig 10
SIA
N
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 11
GLC
O
1 12ALPHA-D-GLUCOPYRANOSE
lig 12
GAL
O
2 11BETA-D-GALACTOPYRANOSE
lig 13
SIA
O
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 14
GLC
P
1 12ALPHA-D-GLUCOPYRANOSE
lig 15
GAL
P
2 11BETA-D-GALACTOPYRANOSE
lig 16
SIA
P
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 17
GAL
Q
1 12BETA-D-GALACTOPYRANOSE
lig 18
SIA
Q
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 19
GLC
R
1 12ALPHA-D-GLUCOPYRANOSE
lig 20
GAL
R
2 11BETA-D-GALACTOPYRANOSE
lig 21
SIA
R
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 22
GLC
S
1 12ALPHA-D-GLUCOPYRANOSE
lig 23
GAL
S
2 11BETA-D-GALACTOPYRANOSE
lig 24
SIA
S
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 25
SIA
A
203 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 26
PEG
A
204 7DI(HYDROXYETHYL)ETHER
lig 27
CL
A
205 1CHLORIDE ION
lig 28
CL
A
206 1CHLORIDE ION
lig 29
CL
A
207 1CHLORIDE ION
lig 30
CL
A
208 1CHLORIDE ION
lig 31
MES
B
201 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 32
PEG
B
202 7DI(HYDROXYETHYL)ETHER
lig 33
CL
B
203 1CHLORIDE ION
lig 34
CL
B
204 1CHLORIDE ION
lig 35
CL
B
205 1CHLORIDE ION
lig 36
MES
C
201 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 37
CL
C
205 1CHLORIDE ION
lig 38
MES
D
201 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 39
CL
D
205 1CHLORIDE ION
lig 40
TRS
D
206 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 41
CA
E
206 1CALCIUM ION
lig 42
PEG
E
207 7DI(HYDROXYETHYL)ETHER
lig 43
CL
E
208 1CHLORIDE ION
lig 44
CA
F
201 1CALCIUM ION
lig 45
PEG
F
202 7DI(HYDROXYETHYL)ETHER
lig 46
PEG
F
203 7DI(HYDROXYETHYL)ETHER
lig 47
PEG
F
204 7DI(HYDROXYETHYL)ETHER
lig 48
CL
F
205 1CHLORIDE ION
lig 49
CL
F
206 1CHLORIDE ION
lig 50
CL
F
207 1CHLORIDE ION
lig 51
MES
G
201 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 52
CA
G
202 1CALCIUM ION
lig 53
PEG
G
203 7DI(HYDROXYETHYL)ETHER
lig 54
PEG
G
204 7DI(HYDROXYETHYL)ETHER
lig 55
CL
G
205 1CHLORIDE ION
lig 56
CL
G
206 1CHLORIDE ION
lig 57
MES
H
201 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 58
CA
H
205 1CALCIUM ION
lig 59
CA
H
206 1CALCIUM ION
lig 60
PEG
H
207 7DI(HYDROXYETHYL)ETHER
lig 61
PEG
H
208 7DI(HYDROXYETHYL)ETHER
lig 62
PEG
H
209 7DI(HYDROXYETHYL)ETHER
lig 63
CL
H
210 1CHLORIDE ION
lig 64
CL
H
211 1CHLORIDE ION
lig 65
TRS
H
212 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 66
CA
I
206 1CALCIUM ION
lig 67
CL
I
207 1CHLORIDE ION
lig 68
CL
I
208 1CHLORIDE ION
lig 69
CL
I
209 1CHLORIDE ION
lig 70
CL
I
210 1CHLORIDE ION
lig 71
MES
J
201 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 72
CA
J
205 1CALCIUM ION
lig 73
PEG
J
206 7DI(HYDROXYETHYL)ETHER
lig 74
CL
J
207 1CHLORIDE ION
lig 75
CL
J
208 1CHLORIDE ION