Analysis of Ligand-Protein Contacts in PDB entry:
5WHY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 5WHY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SF4
A
501 8IRON/SULFUR CLUSTER
lig 2
SF4
A
502 8IRON/SULFUR CLUSTER
lig 3
SF4
A
503 8IRON/SULFUR CLUSTER
lig 4
SAM
A
504 27S-ADENOSYLMETHIONINE
lig 5
CA
A
505 1CALCIUM ION
lig 6
SF4
B
501 8IRON/SULFUR CLUSTER
lig 7
SF4
B
502 8IRON/SULFUR CLUSTER
lig 8
SF4
B
503 8IRON/SULFUR CLUSTER
lig 9
SAM
B
504 27S-ADENOSYLMETHIONINE
lig 10
CA
B
505 1CALCIUM ION
lig 11
CA
B
506 1CALCIUM ION
lig 12
CA
B
507 1CALCIUM ION
lig 13
CA
B
508 1CALCIUM ION