Analysis of Ligand-Protein Contacts in PDB entry:
5WKG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5WKG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
FUC
C
6 10ALPHA-L-FUCOPYRANOSE
lig 7
FUC
C
7 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
FUC
D
2 10ALPHA-L-FUCOPYRANOSE
lig 10
NAG
A
408 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
D21
A
411 46 (9Z)-OCTADEC-9-ENOATE
lig 12
CUY
A
412 36TETRACOSYL OCTADECANOATE
lig 13
PEG
A
413 7DI(HYDROXYETHYL)ETHER
lig 14
CL
A
414 1CHLORIDE ION
lig 15
CL
A
415 1CHLORIDE ION
lig 16
CL
A
416 1CHLORIDE ION
lig 17
EDO
A
417 41,2-ETHANEDIOL
lig 18
IOD
A
418 1IODIDE ION
lig 19
IOD
A
419 1IODIDE ION
lig 20
NA
B
201 1SODIUM ION
lig 21
CL
B
202 1CHLORIDE ION
lig 22
IOD
B
203 1IODIDE ION