Analysis of Ligand-Protein Contacts in PDB entry:
5WYD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5WYD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PTD
A
301 7PENTANEDIAL
lig 2
IPA
B
301 4ISOPROPYL ALCOHOL
lig 3
IPA
C
301 4ISOPROPYL ALCOHOL
lig 4
IPA
C
302 4ISOPROPYL ALCOHOL
lig 5
MPD
C
303 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
PTD
D
301 6PENTANEDIAL
lig 7
IPA
E
301 4ISOPROPYL ALCOHOL
lig 8
PTD
E
302 7PENTANEDIAL
lig 9
IPA
F
301 4ISOPROPYL ALCOHOL
lig 10
IPA
F
302 4ISOPROPYL ALCOHOL
lig 11
IPA
F
303 4ISOPROPYL ALCOHOL
lig 12
MRD
F
304 8(4R)-2-METHYLPENTANE-2,4-DIOL