Analysis of Ligand-Protein Contacts in PDB entry:
5X4A


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 65 ligands in PDB entry 5X4A. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
GAL
N
1 12BETA-D-GALACTOPYRANOSE
lig 4
GLA
N
2 11ALPHA-D-GALACTOPYRANOSE
lig 5
NGA
N
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 6
A2G
N
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 7
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
GAL
P
1 12BETA-D-GALACTOPYRANOSE
lig 10
GLA
P
2 11ALPHA-D-GALACTOPYRANOSE
lig 11
NGA
P
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 12
A2G
P
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 13
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
GAL
S
1 12BETA-D-GALACTOPYRANOSE
lig 18
GLA
S
2 11ALPHA-D-GALACTOPYRANOSE
lig 19
NGA
S
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 20
A2G
S
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 21
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
GAL
U
1 12BETA-D-GALACTOPYRANOSE
lig 24
GLA
U
2 11ALPHA-D-GALACTOPYRANOSE
lig 25
NGA
U
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 26
A2G
U
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 27
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
GAL
W
1 12BETA-D-GALACTOPYRANOSE
lig 30
GLA
W
2 11ALPHA-D-GALACTOPYRANOSE
lig 31
NGA
W
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 32
A2G
W
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 33
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
GAL
Y
1 12BETA-D-GALACTOPYRANOSE
lig 36
GLA
Y
2 11ALPHA-D-GALACTOPYRANOSE
lig 37
NGA
Y
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 38
A2G
Y
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 39
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
GAL
a
1 12BETA-D-GALACTOPYRANOSE
lig 42
GLA
a
2 11ALPHA-D-GALACTOPYRANOSE
lig 43
NGA
a
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 44
A2G
a
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 45
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
GAL
d
1 12BETA-D-GALACTOPYRANOSE
lig 50
GLA
d
2 11ALPHA-D-GALACTOPYRANOSE
lig 51
NGA
d
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 52
A2G
d
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 53
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
GAL
f
1 12BETA-D-GALACTOPYRANOSE
lig 56
GLA
f
2 11ALPHA-D-GALACTOPYRANOSE
lig 57
NGA
f
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 58
A2G
f
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 59
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
GAL
h
1 12BETA-D-GALACTOPYRANOSE
lig 62
GLA
h
2 11ALPHA-D-GALACTOPYRANOSE
lig 63
NGA
h
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 64
A2G
h
4 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 65
GLA
A
107 12ALPHA-D-GALACTOPYRANOSE