Analysis of Ligand-Protein Contacts in PDB entry:
5XAF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 5XAF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
GOL
A
503 6GLYCEROL
lig 4
GOL
A
504 6GLYCEROL
lig 5
CA
A
505 1CALCIUM ION
lig 6
GOL
A
506 6GLYCEROL
lig 7
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 8
MG
B
502 1MAGNESIUM ION
lig 9
GOL
B
503 6GLYCEROL
lig 10
GOL
B
504 6GLYCEROL
lig 11
GOL
B
505 6GLYCEROL
lig 12
CA
B
506 1CALCIUM ION
lig 13
MES
B
507 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 14
84F
B
508 27 5-TRIMETHOXYPHENYL)AZETIDIN-2-ONE
lig 15
GOL
C
501 6GLYCEROL
lig 16
GTP
C
502 32GUANOSINE-5'-TRIPHOSPHATE
lig 17
MG
C
503 1MAGNESIUM ION
lig 18
GOL
C
504 6GLYCEROL
lig 19
GOL
C
505 6GLYCEROL
lig 20
GOL
C
506 6GLYCEROL
lig 21
CA
C
507 1CALCIUM ION
lig 22
IMD
C
508 5IMIDAZOLE
lig 23
IMD
C
509 5IMIDAZOLE
lig 24
GDP
D
501 28GUANOSINE-5'-DIPHOSPHATE
lig 25
MG
D
502 1MAGNESIUM ION
lig 26
GOL
D
503 6GLYCEROL
lig 27
GOL
D
504 6GLYCEROL
lig 28
84F
D
505 27 5-TRIMETHOXYPHENYL)AZETIDIN-2-ONE
lig 29
IMD
E
201 5IMIDAZOLE
lig 30
MG
F
401 1MAGNESIUM ION
lig 31
ACP
F
402 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST