Analysis of Ligand-Protein Contacts in PDB entry:
5XXV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 5XXV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
501 1MAGNESIUM ION
lig 2
GTP
B
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
GDP
B
502 28GUANOSINE-5'-DIPHOSPHATE
lig 4
MG
C
501 1MAGNESIUM ION
lig 5
GTP
D
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
GDP
D
502 28GUANOSINE-5'-DIPHOSPHATE
lig 7
MG
E
501 1MAGNESIUM ION
lig 8
GTP
F
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 9
GDP
F
502 28GUANOSINE-5'-DIPHOSPHATE
lig 10
MG
G
501 1MAGNESIUM ION
lig 11
GTP
H
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 12
GDP
H
502 28GUANOSINE-5'-DIPHOSPHATE
lig 13
MG
I
501 1MAGNESIUM ION
lig 14
GTP
J
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 15
GDP
J
502 28GUANOSINE-5'-DIPHOSPHATE
lig 16
MG
K
501 1MAGNESIUM ION
lig 17
GTP
L
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 18
GDP
L
502 28GUANOSINE-5'-DIPHOSPHATE
lig 19
MG
M
501 1MAGNESIUM ION
lig 20
GTP
N
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 21
GDP
N
502 28GUANOSINE-5'-DIPHOSPHATE
lig 22
MG
O
501 1MAGNESIUM ION
lig 23
GTP
P
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 24
GDP
P
502 28GUANOSINE-5'-DIPHOSPHATE
lig 25
MG
Q
501 1MAGNESIUM ION
lig 26
GTP
R
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 27
GDP
R
502 28GUANOSINE-5'-DIPHOSPHATE