Analysis of Ligand-Protein Contacts in PDB entry:
5Y4N


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5Y4N. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CSO
L
546 7S-HYDROXYCYSTEINE
lig 2
SF4
S
1001 8IRON/SULFUR CLUSTER
lig 3
SF4
S
1002 8IRON/SULFUR CLUSTER
lig 4
F3S
S
1003 7FE3-S4 CLUSTER
lig 5
MPD
S
1004 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
MRD
S
1005 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 7
TRS
S
1006 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 8
MG
L
601 1MAGNESIUM ION
lig 9
MRD
L
603 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 10
MRD
L
604 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 11
FCO
L
605 7CARBONMONOXIDE-(DICYANO) IRON
lig 12
NI
L
606 1NICKEL (II) ION