Analysis of Ligand-Protein Contacts in PDB entry:
5Y5P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 5Y5P. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DUR
A
501 162'-DEOXYURIDINE
lig 2
POP
A
502 9PYROPHOSPHATE 2-
lig 3
POP
A
503 9PYROPHOSPHATE 2-
lig 4
MG
B
201 1MAGNESIUM ION
lig 5
DUR
B
202 162'-DEOXYURIDINE
lig 6
POP
B
203 9PYROPHOSPHATE 2-
lig 7
MG
C
201 1MAGNESIUM ION
lig 8
DUR
C
202 162'-DEOXYURIDINE
lig 9
DUR
D
501 162'-DEOXYURIDINE
lig 10
POP
D
502 9PYROPHOSPHATE 2-
lig 11
MG
D
503 1MAGNESIUM ION
lig 12
MG
E
201 1MAGNESIUM ION
lig 13
DUR
E
202 162'-DEOXYURIDINE
lig 14
DUR
F
501 162'-DEOXYURIDINE
lig 15
POP
F
502 9PYROPHOSPHATE 2-