Analysis of Ligand-Protein Contacts in PDB entry:
5Y86


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 16 ligands in PDB entry 5Y86. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
350 10PHOSPHOSERINE
lig 2
PTR
A
369 16O-PHOSPHOTYROSINE
lig 3
SEP
A
445 10PHOSPHOSERINE
lig 4
TPO
A
512 11PHOSPHOTHREONINE
lig 5
HRM
A
601 167-METHOXY-1-METHYL-9H-BETA-CARBOLINE
lig 6
PO4
A
602 5PHOSPHATE ION
lig 7
PO4
A
603 5PHOSPHATE ION
lig 8
EDO
A
604 41,2-ETHANEDIOL
lig 9
EDO
A
605 41,2-ETHANEDIOL
lig 10
EDO
A
606 41,2-ETHANEDIOL
lig 11
EDO
A
607 41,2-ETHANEDIOL
lig 12
EDO
A
608 41,2-ETHANEDIOL
lig 13
EDO
A
609 41,2-ETHANEDIOL
lig 14
EDO
A
610 41,2-ETHANEDIOL
lig 15
EDO
A
611 41,2-ETHANEDIOL
lig 16
GOL
A
612 6GLYCEROL