Analysis of Ligand-Protein Contacts in PDB entry:
5Y8J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5Y8J. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
301 6GLYCEROL
lig 2
GOL
A
302 6GLYCEROL
lig 3
GOL
A
303 6GLYCEROL
lig 4
AKR
A
304 5ACRYLIC ACID
lig 5
AKR
A
305 5ACRYLIC ACID
lig 6
9ON
A
306 10(2~{S})-2-METHYLPENTANEDIOIC ACID
lig 7
HIU
B
301 7(2R)-3-HYDROXY-2-METHYLPROPANOIC ACID
lig 8
GOL
B
302 6GLYCEROL
lig 9
GOL
B
303 6GLYCEROL
lig 10
AKR
B
304 5ACRYLIC ACID
lig 11
9ON
B
305 10(2~{S})-2-METHYLPENTANEDIOIC ACID