Analysis of Ligand-Protein Contacts in PDB entry:
5Y8N


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5Y8N. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAD
A
301 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 2
SER
A
302 7SERINE
lig 3
SER
A
303 7SERINE
lig 4
GOL
A
304 6GLYCEROL
lig 5
GOL
A
305 6GLYCEROL
lig 6
AKR
A
306 5ACRYLIC ACID
lig 7
9ON
A
307 10(2~{S})-2-METHYLPENTANEDIOIC ACID
lig 8
NAD
B
301 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 9
SER
B
302 7SERINE
lig 10
AKR
B
303 5ACRYLIC ACID