Analysis of Ligand-Protein Contacts in PDB entry:
5YB1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5YB1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PLM
A
601 13PALMITIC ACID
lig 2
PLM
A
602 18PALMITIC ACID
lig 3
PLM
A
603 17PALMITIC ACID
lig 4
PLM
A
604 18PALMITIC ACID
lig 5
PLM
A
605 17PALMITIC ACID
lig 6
PLM
A
606 18PALMITIC ACID
lig 7
PLM
A
607 18PALMITIC ACID
lig 8
8ZR
A
608 16 1(8),3,6,9,11-PENTAEN-4-AMINE
lig 9
PLM
B
601 13PALMITIC ACID
lig 10
PLM
B
602 18PALMITIC ACID
lig 11
PLM
B
603 17PALMITIC ACID
lig 12
PLM
B
604 18PALMITIC ACID
lig 13
PLM
B
605 17PALMITIC ACID
lig 14
PLM
B
606 18PALMITIC ACID
lig 15
PLM
B
607 18PALMITIC ACID
lig 16
8ZR
B
608 16 1(8),3,6,9,11-PENTAEN-4-AMINE