Analysis of Ligand-Protein Contacts in PDB entry:
5YEM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5YEM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
A
701 1CALCIUM ION
lig 2
CA
A
702 1CALCIUM ION
lig 3
CA
A
703 1CALCIUM ION
lig 4
HEM
A
704 43PROTOPORPHYRIN IX CONTAINING FE
lig 5
CA
A
705 1CALCIUM ION
lig 6
CA
B
701 1CALCIUM ION
lig 7
CA
B
702 1CALCIUM ION
lig 8
HEM
B
703 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
CA
C
701 1CALCIUM ION
lig 10
CA
C
702 1CALCIUM ION
lig 11
HEM
C
703 43PROTOPORPHYRIN IX CONTAINING FE
lig 12
CA
D
701 1CALCIUM ION
lig 13
CA
D
702 1CALCIUM ION
lig 14
HEM
D
703 43PROTOPORPHYRIN IX CONTAINING FE