Analysis of Ligand-Protein Contacts in PDB entry:
5YF0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5YF0. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
501 41,2-ETHANEDIOL
lig 2
EDO
A
502 41,2-ETHANEDIOL
lig 3
EDO
A
503 41,2-ETHANEDIOL
lig 4
ACT
A
504 4ACETATE ION
lig 5
SAM
A
505 27S-ADENOSYLMETHIONINE
lig 6
EDO
B
501 41,2-ETHANEDIOL
lig 7
ACT
B
502 4ACETATE ION
lig 8
SAM
B
503 27S-ADENOSYLMETHIONINE
lig 9
CA
B
504 1CALCIUM ION
lig 10
CA
B
505 1CALCIUM ION