Analysis of Ligand-Protein Contacts in PDB entry:
5YFT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 5YFT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
RI2
A
401 181,5-DI-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 2
K
A
402 1POTASSIUM ION
lig 3
CL
A
403 1CHLORIDE ION
lig 4
MRD
A
404 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 5
PEG
A
405 7DI(HYDROXYETHYL)ETHER
lig 6
EDO
A
406 41,2-ETHANEDIOL
lig 7
RI2
B
401 181,5-DI-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 8
K
B
402 1POTASSIUM ION
lig 9
CL
B
403 1CHLORIDE ION
lig 10
PEG
B
404 7DI(HYDROXYETHYL)ETHER
lig 11
RI2
C
401 181,5-DI-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 12
K
C
402 1POTASSIUM ION
lig 13
CL
C
403 1CHLORIDE ION