Analysis of Ligand-Protein Contacts in PDB entry:
5YGK

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 5YGK. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	DST	A	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 2	DST	A	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 3	MG	A	303	1	MAGNESIUM ION
lig 4	DST	B	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 5	DST	B	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 6	MG	B	303	1	MAGNESIUM ION
lig 7	DST	C	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 8	DST	C	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 9	MG	C	303	1	MAGNESIUM ION
lig 10	DST	D	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 11	DST	D	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 12	MG	D	303	1	MAGNESIUM ION
lig 13	DST	E	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 14	DST	E	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 15	MG	E	303	1	MAGNESIUM ION
lig 16	DST	F	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 17	DST	F	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 18	MG	F	303	1	MAGNESIUM ION
lig 19	DST	G	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 20	DST	G	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 21	MG	G	303	1	MAGNESIUM ION
lig 22	DST	H	301	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 23	DST	H	302	14	DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 24	MG	H	303	1	MAGNESIUM ION

Analysis of Ligand-Protein Contacts in PDB entry: 5YGK

Analysis of Ligand-Protein Contacts in PDB entry:
5YGK