Analysis of Ligand-Protein Contacts in PDB entry:
5YLU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5YLU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BFD
A
385 12ASPARTATE BERYLLIUM TRIFLUORIDE
lig 2
HKT
A
1101 24 YL]-~{N}-METHYL-METHANAMINE
lig 3
PCW
A
1102 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 4
PCW
A
1103 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 5
MG
A
1104 1MAGNESIUM ION
lig 6
CE1
A
1105 29O-DODECANYL OCTAETHYLENE GLYCOL
lig 7
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
B
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
B
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
CE1
B
304 19O-DODECANYL OCTAETHYLENE GLYCOL