Analysis of Ligand-Protein Contacts in PDB entry:
5YND


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5YND. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
B
1 12ALPHA-D-GLUCOPYRANOSE
lig 2
GLC
B
2 11ALPHA-D-GLUCOPYRANOSE
lig 3
GLC
B
3 11ALPHA-D-GLUCOPYRANOSE
lig 4
GLC
B
4 11ALPHA-D-GLUCOPYRANOSE
lig 5
CA
A
1101 1CALCIUM ION
lig 6
CA
A
1102 1CALCIUM ION
lig 7
CA
A
1103 1CALCIUM ION
lig 8
CA
A
1104 1CALCIUM ION
lig 9
CA
A
1105 1CALCIUM ION
lig 10
PEG
A
1106 7DI(HYDROXYETHYL)ETHER
lig 11
PEG
A
1107 7DI(HYDROXYETHYL)ETHER
lig 12
GOL
A
1108 6GLYCEROL
lig 13
GOL
A
1109 6GLYCEROL
lig 14
GOL
A
1110 6GLYCEROL
lig 15
GOL
A
1111 6GLYCEROL
lig 16
GOL
A
1112 6GLYCEROL