Analysis of Ligand-Protein Contacts in PDB entry:
5YNE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 5YNE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
B
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
GLC
B
2 11ALPHA-D-GLUCOPYRANOSE
lig 3
GLC
B
3 11ALPHA-D-GLUCOPYRANOSE
lig 4
GLC
B
4 11ALPHA-D-GLUCOPYRANOSE
lig 5
GLC
B
5 11ALPHA-D-GLUCOPYRANOSE
lig 6
GLC
B
6 11ALPHA-D-GLUCOPYRANOSE
lig 7
GLC
C
1 11ALPHA-D-GLUCOPYRANOSE
lig 8
GLC
C
2 11ALPHA-D-GLUCOPYRANOSE
lig 9
GLC
C
3 11ALPHA-D-GLUCOPYRANOSE
lig 10
GLC
C
4 11ALPHA-D-GLUCOPYRANOSE
lig 11
GLC
C
5 11ALPHA-D-GLUCOPYRANOSE
lig 12
GLC
C
6 11ALPHA-D-GLUCOPYRANOSE
lig 13
CA
A
1101 1CALCIUM ION
lig 14
CA
A
1102 1CALCIUM ION
lig 15
CA
A
1103 1CALCIUM ION
lig 16
CA
A
1104 1CALCIUM ION
lig 17
CA
A
1105 1CALCIUM ION
lig 18
GOL
A
1106 6GLYCEROL
lig 19
GOL
A
1107 6GLYCEROL
lig 20
GOL
A
1108 6GLYCEROL
lig 21
GOL
A
1109 6GLYCEROL
lig 22
GOL
A
1110 6GLYCEROL
lig 23
GOL
A
1111 6GLYCEROL
lig 24
PEG
A
1112 7DI(HYDROXYETHYL)ETHER