Analysis of Ligand-Protein Contacts in PDB entry:
5YNH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5YNH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
B
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
GLC
B
2 11ALPHA-D-GLUCOPYRANOSE
lig 3
GLC
B
3 11ALPHA-D-GLUCOPYRANOSE
lig 4
GLC
B
4 11ALPHA-D-GLUCOPYRANOSE
lig 5
GLC
B
5 11ALPHA-D-GLUCOPYRANOSE
lig 6
GLC
B
6 11ALPHA-D-GLUCOPYRANOSE
lig 7
GLC
B
7 11ALPHA-D-GLUCOPYRANOSE
lig 8
GLC
B
8 11ALPHA-D-GLUCOPYRANOSE
lig 9
GLC
C
1 11ALPHA-D-GLUCOPYRANOSE
lig 10
GLC
C
2 11ALPHA-D-GLUCOPYRANOSE
lig 11
GLC
C
3 11ALPHA-D-GLUCOPYRANOSE
lig 12
GLC
C
4 11ALPHA-D-GLUCOPYRANOSE
lig 13
GLC
C
5 11ALPHA-D-GLUCOPYRANOSE
lig 14
GLC
C
6 11ALPHA-D-GLUCOPYRANOSE
lig 15
GLC
C
7 11ALPHA-D-GLUCOPYRANOSE
lig 16
GLC
C
8 11ALPHA-D-GLUCOPYRANOSE
lig 17
CA
A
1117 1CALCIUM ION
lig 18
CA
A
1118 1CALCIUM ION
lig 19
CA
A
1119 1CALCIUM ION
lig 20
CA
A
1120 1CALCIUM ION
lig 21
CA
A
1121 1CALCIUM ION
lig 22
GOL
A
1122 6GLYCEROL