Analysis of Ligand-Protein Contacts in PDB entry:
5YPP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5YPP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
VAL
A
101 8VALINE
lig 2
VAL
A
102 8VALINE
lig 3
PEG
A
103 7DI(HYDROXYETHYL)ETHER
lig 4
PEG
B
101 7DI(HYDROXYETHYL)ETHER
lig 5
PEG
B
102 7DI(HYDROXYETHYL)ETHER
lig 6
VAL
C
101 8VALINE
lig 7
VAL
C
102 8VALINE
lig 8
PEG
C
103 7DI(HYDROXYETHYL)ETHER
lig 9
PEG
C
104 7DI(HYDROXYETHYL)ETHER
lig 10
PEG
D
101 7DI(HYDROXYETHYL)ETHER
lig 11
VAL
E
101 8VALINE
lig 12
PEG
E
102 7DI(HYDROXYETHYL)ETHER
lig 13
VAL
F
101 8VALINE
lig 14
ACT
F
102 4ACETATE ION
lig 15
PEG
F
103 7DI(HYDROXYETHYL)ETHER
lig 16
PEG
F
104 7DI(HYDROXYETHYL)ETHER