Analysis of Ligand-Protein Contacts in PDB entry:
5YPS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 5YPS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
A
301 1CALCIUM ION
lig 2
CA
A
302 1CALCIUM ION
lig 3
1PE
A
303 16PENTAETHYLENE GLYCOL
lig 4
1PE
A
304 16PENTAETHYLENE GLYCOL
lig 5
1PE
A
305 16PENTAETHYLENE GLYCOL
lig 6
PEG
A
306 7DI(HYDROXYETHYL)ETHER
lig 7
GOL
A
307 6GLYCEROL
lig 8
GOL
A
308 6GLYCEROL
lig 9
CA
B
301 1CALCIUM ION
lig 10
CA
B
302 1CALCIUM ION
lig 11
CA
B
303 1CALCIUM ION
lig 12
1PE
B
304 16PENTAETHYLENE GLYCOL
lig 13
1PE
B
305 16PENTAETHYLENE GLYCOL
lig 14
1PE
B
306 16PENTAETHYLENE GLYCOL
lig 15
PEG
B
307 7DI(HYDROXYETHYL)ETHER
lig 16
GOL
B
308 6GLYCEROL
lig 17
CA
C
301 1CALCIUM ION
lig 18
1PE
C
302 16PENTAETHYLENE GLYCOL
lig 19
1PE
C
303 16PENTAETHYLENE GLYCOL
lig 20
1PE
C
304 16PENTAETHYLENE GLYCOL
lig 21
GOL
C
305 6GLYCEROL
lig 22
PGE
C
306 10TRIETHYLENE GLYCOL
lig 23
CA
D
301 1CALCIUM ION
lig 24
CA
D
302 1CALCIUM ION
lig 25
1PE
D
303 16PENTAETHYLENE GLYCOL
lig 26
1PE
D
304 16PENTAETHYLENE GLYCOL
lig 27
1PE
D
305 16PENTAETHYLENE GLYCOL
lig 28
PEG
D
306 7DI(HYDROXYETHYL)ETHER
lig 29
GOL
D
307 6GLYCEROL
lig 30
GOL
D
308 6GLYCEROL
lig 31
GOL
D
309 6GLYCEROL
lig 32
CA
E
301 1CALCIUM ION
lig 33
CA
E
302 1CALCIUM ION
lig 34
1PE
E
303 16PENTAETHYLENE GLYCOL
lig 35
1PE
E
304 16PENTAETHYLENE GLYCOL
lig 36
1PE
E
305 16PENTAETHYLENE GLYCOL
lig 37
1PE
E
306 16PENTAETHYLENE GLYCOL
lig 38
PEG
E
307 7DI(HYDROXYETHYL)ETHER
lig 39
GOL
E
308 6GLYCEROL
lig 40
GOL
E
309 6GLYCEROL
lig 41
GOL
E
310 6GLYCEROL
lig 42
CA
F
301 1CALCIUM ION
lig 43
CA
F
302 1CALCIUM ION
lig 44
1PE
F
303 16PENTAETHYLENE GLYCOL
lig 45
1PE
F
304 16PENTAETHYLENE GLYCOL
lig 46
1PE
F
305 16PENTAETHYLENE GLYCOL
lig 47
PEG
F
306 7DI(HYDROXYETHYL)ETHER
lig 48
PEG
F
307 7DI(HYDROXYETHYL)ETHER
lig 49
GOL
F
308 6GLYCEROL
lig 50
GOL
F
309 6GLYCEROL
lig 51
GOL
F
310 6GLYCEROL