Analysis of Ligand-Protein Contacts in PDB entry:
5YQ7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 72 ligands in PDB entry 5YQ7. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BCL
E
101 66BACTERIOCHLOROPHYLL A
lig 2
BCL
E
102 66BACTERIOCHLOROPHYLL A
lig 3
BCL
B
101 66BACTERIOCHLOROPHYLL A
lig 4
BCL
B
102 66BACTERIOCHLOROPHYLL A
lig 5
BCL
0
101 66BACTERIOCHLOROPHYLL A
lig 6
BCL
0
102 66BACTERIOCHLOROPHYLL A
lig 7
BCL
L
1001 66BACTERIOCHLOROPHYLL A
lig 8
BCL
L
1002 66BACTERIOCHLOROPHYLL A
lig 9
BPH
L
1003 65BACTERIOPHEOPHYTIN A
lig 10
MQE
L
1004 68 38,42-UNDECAEN-1-YL]NAPHTHALENE-1,4-DIONE
lig 11
BCL
8
101 66BACTERIOCHLOROPHYLL A
lig 12
BCL
8
102 66BACTERIOCHLOROPHYLL A
lig 13
BCL
6
101 66BACTERIOCHLOROPHYLL A
lig 14
BCL
6
102 66BACTERIOCHLOROPHYLL A
lig 15
BCL
4
101 66BACTERIOCHLOROPHYLL A
lig 16
BCL
4
102 66BACTERIOCHLOROPHYLL A
lig 17
BCL
2
101 66BACTERIOCHLOROPHYLL A
lig 18
BCL
2
102 66BACTERIOCHLOROPHYLL A
lig 19
BCL
K
101 66BACTERIOCHLOROPHYLL A
lig 20
BCL
K
102 66BACTERIOCHLOROPHYLL A
lig 21
HEM
C
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 22
HEM
C
502 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
HEM
C
503 43PROTOPORPHYRIN IX CONTAINING FE
lig 24
HEM
C
504 43PROTOPORPHYRIN IX CONTAINING FE
lig 25
BCL
I
101 66BACTERIOCHLOROPHYLL A
lig 26
BCL
I
102 66BACTERIOCHLOROPHYLL A
lig 27
BCL
G
101 66BACTERIOCHLOROPHYLL A
lig 28
BCL
G
102 66BACTERIOCHLOROPHYLL A
lig 29
BCL
W
101 66BACTERIOCHLOROPHYLL A
lig 30
BCL
W
102 66BACTERIOCHLOROPHYLL A
lig 31
BCL
U
101 66BACTERIOCHLOROPHYLL A
lig 32
BCL
U
102 66BACTERIOCHLOROPHYLL A
lig 33
KGD
T
101 41BETA,PSI-CAROTEN-4-ONE
lig 34
KGD
T
102 41BETA,PSI-CAROTEN-4-ONE
lig 35
BCL
T
103 66BACTERIOCHLOROPHYLL A
lig 36
BCL
S
101 66BACTERIOCHLOROPHYLL A
lig 37
BCL
S
102 66BACTERIOCHLOROPHYLL A
lig 38
BCL
Q
101 66BACTERIOCHLOROPHYLL A
lig 39
BCL
Q
102 66BACTERIOCHLOROPHYLL A
lig 40
BCL
O
101 66BACTERIOCHLOROPHYLL A
lig 41
BCL
O
102 66BACTERIOCHLOROPHYLL A
lig 42
BCL
V
101 66BACTERIOCHLOROPHYLL A
lig 43
KGD
R
101 41BETA,PSI-CAROTEN-4-ONE
lig 44
BCL
R
102 66BACTERIOCHLOROPHYLL A
lig 45
BCL
P
101 66BACTERIOCHLOROPHYLL A
lig 46
KGD
N
101 41BETA,PSI-CAROTEN-4-ONE
lig 47
KGD
N
102 41BETA,PSI-CAROTEN-4-ONE
lig 48
BCL
N
103 66BACTERIOCHLOROPHYLL A
lig 49
KGD
J
101 41BETA,PSI-CAROTEN-4-ONE
lig 50
BCL
J
102 66BACTERIOCHLOROPHYLL A
lig 51
BCL
H
101 66BACTERIOCHLOROPHYLL A
lig 52
KGD
H
102 41BETA,PSI-CAROTEN-4-ONE
lig 53
KGD
F
101 41BETA,PSI-CAROTEN-4-ONE
lig 54
BCL
F
102 66BACTERIOCHLOROPHYLL A
lig 55
BCL
D
101 66BACTERIOCHLOROPHYLL A
lig 56
KGD
A
101 41BETA,PSI-CAROTEN-4-ONE
lig 57
BCL
A
102 66BACTERIOCHLOROPHYLL A
lig 58
KGD
9
101 41BETA,PSI-CAROTEN-4-ONE
lig 59
KGD
9
102 41BETA,PSI-CAROTEN-4-ONE
lig 60
BCL
9
103 66BACTERIOCHLOROPHYLL A
lig 61
BCL
7
101 66BACTERIOCHLOROPHYLL A
lig 62
KGD
5
101 41BETA,PSI-CAROTEN-4-ONE
lig 63
BCL
5
102 66BACTERIOCHLOROPHYLL A
lig 64
KGD
3
101 41BETA,PSI-CAROTEN-4-ONE
lig 65
BCL
3
102 66BACTERIOCHLOROPHYLL A
lig 66
KGD
3
103 41BETA,PSI-CAROTEN-4-ONE
lig 67
BCL
1
101 66BACTERIOCHLOROPHYLL A
lig 68
FE
M
701 1FE (III) ION
lig 69
MQE
M
702 68 38,42-UNDECAEN-1-YL]NAPHTHALENE-1,4-DIONE
lig 70
BCL
M
703 66BACTERIOCHLOROPHYLL A
lig 71
BPH
M
704 65BACTERIOPHEOPHYTIN A
lig 72
BPH
M
705 65BACTERIOPHEOPHYTIN A