Analysis of Ligand-Protein Contacts in PDB entry:
5YQH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 5YQH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HEM
A
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
8ZX
A
502 114-METHOXYBENZAMIDE
lig 3
8ZX
A
503 114-METHOXYBENZAMIDE
lig 4
8ZX
A
504 114-METHOXYBENZAMIDE
lig 5
CL
A
505 1CHLORIDE ION
lig 6
GOL
A
506 6GLYCEROL
lig 7
SO4
A
507 5SULFATE ION
lig 8
SO4
A
508 5SULFATE ION
lig 9
SO4
A
509 5SULFATE ION
lig 10
SO4
A
510 5SULFATE ION
lig 11
SO4
A
511 5SULFATE ION
lig 12
SO4
A
512 5SULFATE ION
lig 13
HEM
B
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 14
8ZX
B
502 114-METHOXYBENZAMIDE
lig 15
8ZX
B
503 114-METHOXYBENZAMIDE
lig 16
8ZX
B
504 114-METHOXYBENZAMIDE
lig 17
CL
B
505 1CHLORIDE ION
lig 18
GOL
B
506 6GLYCEROL
lig 19
GOL
B
507 6GLYCEROL
lig 20
SO4
B
508 5SULFATE ION
lig 21
SO4
B
509 5SULFATE ION
lig 22
SO4
B
510 5SULFATE ION
lig 23
SO4
B
511 5SULFATE ION
lig 24
HEM
C
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 25
8ZX
C
502 114-METHOXYBENZAMIDE
lig 26
CL
C
503 1CHLORIDE ION
lig 27
GOL
C
504 6GLYCEROL
lig 28
GOL
C
505 6GLYCEROL
lig 29
SO4
C
506 5SULFATE ION
lig 30
SO4
C
507 5SULFATE ION
lig 31
SO4
C
508 5SULFATE ION
lig 32
HEM
D
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 33
8ZX
D
502 114-METHOXYBENZAMIDE
lig 34
CL
D
503 1CHLORIDE ION
lig 35
GOL
D
504 6GLYCEROL
lig 36
GOL
D
505 6GLYCEROL
lig 37
SO4
D
506 5SULFATE ION