Analysis of Ligand-Protein Contacts in PDB entry:
5YSU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5YSU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
301 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
302 1MAGNESIUM ION
lig 3
CL
A
303 1CHLORIDE ION
lig 4
NO3
A
304 4NITRATE ION
lig 5
NO3
A
305 4NITRATE ION
lig 6
F2X
C
1101 14 DIONE
lig 7
F2X
C
1102 14 DIONE
lig 8
CL
C
1103 1CHLORIDE ION
lig 9
NA
C
1104 1SODIUM ION
lig 10
NO3
C
1105 4NITRATE ION
lig 11
NO3
C
1106 4NITRATE ION