Analysis of Ligand-Protein Contacts in PDB entry:
5YX2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5YX2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PYO
E
427 191-(BETA-D-RIBOFURANOSYL)-PYRIMIDIN-2-ONE-5
lig 2
PYO
F
427 191-(BETA-D-RIBOFURANOSYL)-PYRIMIDIN-2-ONE-5
lig 3
GOL
A
1001 6GLYCEROL
lig 4
GOL
A
1002 6GLYCEROL
lig 5
GOL
A
1003 6GLYCEROL
lig 6
GOL
A
1004 6GLYCEROL
lig 7
SAH
A
1005 26S-ADENOSYL-L-HOMOCYSTEINE
lig 8
GOL
D
1001 6GLYCEROL
lig 9
SAH
D
1002 26S-ADENOSYL-L-HOMOCYSTEINE
lig 10
GOL
E
501 6GLYCEROL