Analysis of Ligand-Protein Contacts in PDB entry:
5Z4P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 5Z4P. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
GOL
A
503 6GLYCEROL
lig 4
GOL
A
504 6GLYCEROL
lig 5
CA
A
505 1CALCIUM ION
lig 6
GOL
A
506 6GLYCEROL
lig 7
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 8
MG
B
502 1MAGNESIUM ION
lig 9
GOL
B
503 6GLYCEROL
lig 10
CA
B
504 1CALCIUM ION
lig 11
MES
B
505 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 12
97O
B
506 27 BENZO[E]INDAZOLE
lig 13
GOL
C
501 6GLYCEROL
lig 14
GOL
C
502 6GLYCEROL
lig 15
GTP
C
503 32GUANOSINE-5'-TRIPHOSPHATE
lig 16
MG
C
504 1MAGNESIUM ION
lig 17
GOL
C
505 6GLYCEROL
lig 18
GOL
C
506 6GLYCEROL
lig 19
GOL
C
507 6GLYCEROL
lig 20
CA
C
508 1CALCIUM ION
lig 21
IMD
C
509 5IMIDAZOLE
lig 22
IMD
C
510 5IMIDAZOLE
lig 23
IMD
C
511 5IMIDAZOLE
lig 24
GDP
D
501 28GUANOSINE-5'-DIPHOSPHATE
lig 25
MG
D
502 1MAGNESIUM ION
lig 26
GOL
D
503 6GLYCEROL
lig 27
GOL
D
504 6GLYCEROL
lig 28
ACP
F
401 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST