Analysis of Ligand-Protein Contacts in PDB entry:
5ZJI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 272 ligands in PDB entry 5ZJI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
Y
3 11PHOSPHOTHREONINE
lig 2
CHL
1
601 55CHLOROPHYLL B
lig 3
CLA
1
602 61CHLOROPHYLL A
lig 4
CLA
1
603 55CHLOROPHYLL A
lig 5
CLA
1
604 49CHLOROPHYLL A
lig 6
CLA
1
606 40CHLOROPHYLL A
lig 7
CHL
1
607 41CHLOROPHYLL B
lig 8
CLA
1
608 44CHLOROPHYLL A
lig 9
CLA
1
609 40CHLOROPHYLL A
lig 10
CLA
1
610 59CHLOROPHYLL A
lig 11
CLA
1
611 38CHLOROPHYLL A
lig 12
CLA
1
612 45CHLOROPHYLL A
lig 13
CLA
1
613 65CHLOROPHYLL A
lig 14
CLA
1
614 38CHLOROPHYLL A
lig 15
CLA
1
616 43CHLOROPHYLL A
lig 16
LUT
1
617 42 CAROTENE-3,3'-DIOL
lig 17
XAT
1
618 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 18
BCR
1
619 40BETA-CAROTENE
lig 19
LHG
1
620 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 20
LUT
1
621 42 CAROTENE-3,3'-DIOL
lig 21
LMG
1
622 531,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 22
CHL
2
601 61CHLOROPHYLL B
lig 23
CLA
2
602 65CHLOROPHYLL A
lig 24
CLA
2
603 44CHLOROPHYLL A
lig 25
CLA
2
604 43CHLOROPHYLL A
lig 26
CHL
2
606 42CHLOROPHYLL B
lig 27
CHL
2
607 43CHLOROPHYLL B
lig 28
CHL
2
608 51CHLOROPHYLL B
lig 29
CLA
2
609 45CHLOROPHYLL A
lig 30
CLA
2
610 55CHLOROPHYLL A
lig 31
CLA
2
611 38CHLOROPHYLL A
lig 32
CLA
2
612 44CHLOROPHYLL A
lig 33
CLA
2
613 65CHLOROPHYLL A
lig 34
CLA
2
614 43CHLOROPHYLL A
lig 35
CHL
2
618 43CHLOROPHYLL B
lig 36
LUT
2
619 42 CAROTENE-3,3'-DIOL
lig 37
XAT
2
620 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 38
BCR
2
621 40BETA-CAROTENE
lig 39
LHG
2
622 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 40
LMG
2
623 361,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 41
CLA
3
602 60CHLOROPHYLL A
lig 42
CLA
3
603 55CHLOROPHYLL A
lig 43
CLA
3
604 42CHLOROPHYLL A
lig 44
CLA
3
606 41CHLOROPHYLL A
lig 45
CLA
3
607 41CHLOROPHYLL A
lig 46
CHL
3
608 45CHLOROPHYLL B
lig 47
CLA
3
609 45CHLOROPHYLL A
lig 48
CLA
3
610 41CHLOROPHYLL A
lig 49
CLA
3
612 43CHLOROPHYLL A
lig 50
CLA
3
613 54CHLOROPHYLL A
lig 51
CLA
3
614 40CHLOROPHYLL A
lig 52
CLA
3
615 36CHLOROPHYLL A
lig 53
CLA
3
617 40CHLOROPHYLL A
lig 54
LUT
3
618 42 CAROTENE-3,3'-DIOL
lig 55
XAT
3
619 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 56
BCR
3
620 40BETA-CAROTENE
lig 57
CLA
4
601 46CHLOROPHYLL A
lig 58
CLA
4
602 60CHLOROPHYLL A
lig 59
CLA
4
603 44CHLOROPHYLL A
lig 60
CLA
4
604 43CHLOROPHYLL A
lig 61
CHL
4
606 41CHLOROPHYLL B
lig 62
CHL
4
607 41CHLOROPHYLL B
lig 63
CHL
4
608 46CHLOROPHYLL B
lig 64
CLA
4
609 45CHLOROPHYLL A
lig 65
CLA
4
610 54CHLOROPHYLL A
lig 66
CLA
4
611 42CHLOROPHYLL A
lig 67
CLA
4
612 41CHLOROPHYLL A
lig 68
CLA
4
613 57CHLOROPHYLL A
lig 69
CLA
4
614 45CHLOROPHYLL A
lig 70
CLA
4
617 50CHLOROPHYLL A
lig 71
CHL
4
618 41CHLOROPHYLL B
lig 72
LUT
4
619 42 CAROTENE-3,3'-DIOL
lig 73
XAT
4
620 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 74
BCR
4
621 40BETA-CAROTENE
lig 75
LMG
4
622 391,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 76
LMG
4
623 331,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 77
CL0
A
801 65CHLOROPHYLL A ISOMER
lig 78
CLA
A
802 65CHLOROPHYLL A
lig 79
CLA
A
803 65CHLOROPHYLL A
lig 80
CLA
A
804 65CHLOROPHYLL A
lig 81
CLA
A
805 52CHLOROPHYLL A
lig 82
CLA
A
806 65CHLOROPHYLL A
lig 83
CLA
A
807 65CHLOROPHYLL A
lig 84
CLA
A
808 50CHLOROPHYLL A
lig 85
CLA
A
809 65CHLOROPHYLL A
lig 86
CLA
A
810 50CHLOROPHYLL A
lig 87
CLA
A
811 65CHLOROPHYLL A
lig 88
CLA
A
812 65CHLOROPHYLL A
lig 89
CLA
A
813 54CHLOROPHYLL A
lig 90
CLA
A
814 65CHLOROPHYLL A
lig 91
CLA
A
815 45CHLOROPHYLL A
lig 92
CLA
A
816 42CHLOROPHYLL A
lig 93
CLA
A
817 45CHLOROPHYLL A
lig 94
CLA
A
818 60CHLOROPHYLL A
lig 95
CLA
A
819 59CHLOROPHYLL A
lig 96
CLA
A
820 65CHLOROPHYLL A
lig 97
CLA
A
821 45CHLOROPHYLL A
lig 98
CLA
A
822 65CHLOROPHYLL A
lig 99
CLA
A
823 42CHLOROPHYLL A
lig 100
CLA
A
824 41CHLOROPHYLL A
lig 101
CLA
A
825 55CHLOROPHYLL A
lig 102
CLA
A
826 65CHLOROPHYLL A
lig 103
CLA
A
827 59CHLOROPHYLL A
lig 104
CLA
A
828 65CHLOROPHYLL A
lig 105
CLA
A
829 65CHLOROPHYLL A
lig 106
CLA
A
830 65CHLOROPHYLL A
lig 107
CLA
A
831 65CHLOROPHYLL A
lig 108
CLA
A
832 50CHLOROPHYLL A
lig 109
CLA
A
833 56CHLOROPHYLL A
lig 110
CLA
A
834 65CHLOROPHYLL A
lig 111
CLA
A
835 65CHLOROPHYLL A
lig 112
CLA
A
836 45CHLOROPHYLL A
lig 113
CLA
A
837 45CHLOROPHYLL A
lig 114
CLA
A
838 51CHLOROPHYLL A
lig 115
CLA
A
839 55CHLOROPHYLL A
lig 116
CLA
A
840 52CHLOROPHYLL A
lig 117
CLA
A
841 65CHLOROPHYLL A
lig 118
CLA
A
842 65CHLOROPHYLL A
lig 119
CLA
A
843 65CHLOROPHYLL A
lig 120
PQN
A
844 33PHYLLOQUINONE
lig 121
CLA
A
845 50CHLOROPHYLL A
lig 122
LHG
A
846 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 123
LHG
A
847 301,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 124
BCR
A
848 40BETA-CAROTENE
lig 125
BCR
A
849 40BETA-CAROTENE
lig 126
BCR
A
850 40BETA-CAROTENE
lig 127
BCR
A
851 40BETA-CAROTENE
lig 128
BCR
A
852 40BETA-CAROTENE
lig 129
SF4
A
853 8IRON/SULFUR CLUSTER
lig 130
CLA
A
854 65CHLOROPHYLL A
lig 131
BCR
A
856 40BETA-CAROTENE
lig 132
LMU
A
857 30DODECYL-ALPHA-D-MALTOSIDE
lig 133
BCR
B
801 40BETA-CAROTENE
lig 134
CLA
B
802 65CHLOROPHYLL A
lig 135
CLA
B
803 65CHLOROPHYLL A
lig 136
CLA
B
804 41CHLOROPHYLL A
lig 137
CLA
B
805 65CHLOROPHYLL A
lig 138
CLA
B
806 65CHLOROPHYLL A
lig 139
CLA
B
807 52CHLOROPHYLL A
lig 140
CLA
B
808 65CHLOROPHYLL A
lig 141
CLA
B
809 65CHLOROPHYLL A
lig 142
CLA
B
810 65CHLOROPHYLL A
lig 143
CLA
B
811 54CHLOROPHYLL A
lig 144
CLA
B
812 43CHLOROPHYLL A
lig 145
CLA
B
813 65CHLOROPHYLL A
lig 146
CLA
B
814 65CHLOROPHYLL A
lig 147
CLA
B
815 43CHLOROPHYLL A
lig 148
CLA
B
816 55CHLOROPHYLL A
lig 149
CLA
B
817 59CHLOROPHYLL A
lig 150
CLA
B
818 60CHLOROPHYLL A
lig 151
CLA
B
819 55CHLOROPHYLL A
lig 152
CLA
B
820 50CHLOROPHYLL A
lig 153
CLA
B
821 47CHLOROPHYLL A
lig 154
CLA
B
822 42CHLOROPHYLL A
lig 155
CLA
B
823 45CHLOROPHYLL A
lig 156
CLA
B
824 65CHLOROPHYLL A
lig 157
CLA
B
825 62CHLOROPHYLL A
lig 158
CLA
B
826 62CHLOROPHYLL A
lig 159
CLA
B
827 65CHLOROPHYLL A
lig 160
CLA
B
828 65CHLOROPHYLL A
lig 161
CLA
B
829 56CHLOROPHYLL A
lig 162
CLA
B
830 43CHLOROPHYLL A
lig 163
CLA
B
831 43CHLOROPHYLL A
lig 164
CLA
B
832 65CHLOROPHYLL A
lig 165
CLA
B
833 45CHLOROPHYLL A
lig 166
CLA
B
834 60CHLOROPHYLL A
lig 167
CLA
B
835 42CHLOROPHYLL A
lig 168
CLA
B
836 50CHLOROPHYLL A
lig 169
CLA
B
837 65CHLOROPHYLL A
lig 170
CLA
B
838 47CHLOROPHYLL A
lig 171
CLA
B
839 65CHLOROPHYLL A
lig 172
CLA
B
840 65CHLOROPHYLL A
lig 173
CLA
B
841 65CHLOROPHYLL A
lig 174
PQN
B
842 33PHYLLOQUINONE
lig 175
BCR
B
843 40BETA-CAROTENE
lig 176
BCR
B
844 40BETA-CAROTENE
lig 177
BCR
B
845 40BETA-CAROTENE
lig 178
BCR
B
846 40BETA-CAROTENE
lig 179
BCR
B
847 40BETA-CAROTENE
lig 180
BCR
B
848 40BETA-CAROTENE
lig 181
LMU
B
849 35DODECYL-ALPHA-D-MALTOSIDE
lig 182
DGD
B
850 66DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 183
LHG
B
851 381,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 184
SF4
C
101 8IRON/SULFUR CLUSTER
lig 185
SF4
C
102 8IRON/SULFUR CLUSTER
lig 186
CLA
F
301 57CHLOROPHYLL A
lig 187
CLA
F
303 42CHLOROPHYLL A
lig 188
CLA
F
304 41CHLOROPHYLL A
lig 189
BCR
F
305 40BETA-CAROTENE
lig 190
CLA
G
201 45CHLOROPHYLL A
lig 191
LMG
G
202 381,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 192
CLA
G
203 42CHLOROPHYLL A
lig 193
CLA
G
204 45CHLOROPHYLL A
lig 194
BCR
G
205 40BETA-CAROTENE
lig 195
CLA
H
201 60CHLOROPHYLL A
lig 196
BCR
I
101 40BETA-CAROTENE
lig 197
CLA
J
101 42CHLOROPHYLL A
lig 198
BCR
J
102 40BETA-CAROTENE
lig 199
DGD
J
103 66DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 200
CLA
K
201 37CHLOROPHYLL A
lig 201
BCR
K
202 40BETA-CAROTENE
lig 202
CLA
K
203 45CHLOROPHYLL A
lig 203
CLA
K
204 46CHLOROPHYLL A
lig 204
BCR
K
205 40BETA-CAROTENE
lig 205
CLA
K
206 39CHLOROPHYLL A
lig 206
BCR
L
301 40BETA-CAROTENE
lig 207
CLA
L
302 45CHLOROPHYLL A
lig 208
CLA
L
303 60CHLOROPHYLL A
lig 209
CLA
L
304 45CHLOROPHYLL A
lig 210
BCR
L
305 40BETA-CAROTENE
lig 211
BCR
L
306 40BETA-CAROTENE
lig 212
CLA
O
2001 38CHLOROPHYLL A
lig 213
CLA
O
2002 38CHLOROPHYLL A
lig 214
CLA
N
1001 45CHLOROPHYLL A
lig 215
CLA
N
1002 50CHLOROPHYLL A
lig 216
CHL
X
601 38CHLOROPHYLL B
lig 217
CLA
X
602 41CHLOROPHYLL A
lig 218
CLA
X
603 40CHLOROPHYLL A
lig 219
CLA
X
604 35CHLOROPHYLL A
lig 220
CHL
X
605 42CHLOROPHYLL B
lig 221
CHL
X
606 39CHLOROPHYLL B
lig 222
CHL
X
607 41CHLOROPHYLL B
lig 223
CHL
X
608 39CHLOROPHYLL B
lig 224
CHL
X
609 36CHLOROPHYLL B
lig 225
CLA
X
610 39CHLOROPHYLL A
lig 226
CLA
X
611 39CHLOROPHYLL A
lig 227
CLA
X
612 36CHLOROPHYLL A
lig 228
CLA
X
613 36CHLOROPHYLL A
lig 229
CLA
X
614 39CHLOROPHYLL A
lig 230
LUT
X
2620 42 CAROTENE-3,3'-DIOL
lig 231
LUT
X
2621 42 CAROTENE-3,3'-DIOL
lig 232
NEX
X
2623 44 DIOL
lig 233
LHG
X
2630 221,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 234
XAT
X
7622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 235
CHL
Y
601 63CHLOROPHYLL B
lig 236
CLA
Y
602 45CHLOROPHYLL A
lig 237
CLA
Y
603 39CHLOROPHYLL A
lig 238
CLA
Y
604 42CHLOROPHYLL A
lig 239
CHL
Y
605 38CHLOROPHYLL B
lig 240
CHL
Y
606 38CHLOROPHYLL B
lig 241
CHL
Y
607 40CHLOROPHYLL B
lig 242
CHL
Y
608 40CHLOROPHYLL B
lig 243
CHL
Y
609 40CHLOROPHYLL B
lig 244
CLA
Y
610 39CHLOROPHYLL A
lig 245
CLA
Y
611 40CHLOROPHYLL A
lig 246
CLA
Y
612 38CHLOROPHYLL A
lig 247
CLA
Y
613 43CHLOROPHYLL A
lig 248
CLA
Y
614 39CHLOROPHYLL A
lig 249
XAT
Y
2622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 250
LUT
Y
4620 42 CAROTENE-3,3'-DIOL
lig 251
LUT
Y
4621 42 CAROTENE-3,3'-DIOL
lig 252
NEX
Y
4623 44 DIOL
lig 253
LHG
Y
4630 451,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 254
CHL
Z
601 42CHLOROPHYLL B
lig 255
CLA
Z
602 52CHLOROPHYLL A
lig 256
CLA
Z
603 41CHLOROPHYLL A
lig 257
CLA
Z
604 46CHLOROPHYLL A
lig 258
CHL
Z
605 38CHLOROPHYLL B
lig 259
CHL
Z
606 39CHLOROPHYLL B
lig 260
CHL
Z
607 44CHLOROPHYLL B
lig 261
CHL
Z
608 45CHLOROPHYLL B
lig 262
CHL
Z
609 42CHLOROPHYLL B
lig 263
CLA
Z
610 36CHLOROPHYLL A
lig 264
CLA
Z
611 39CHLOROPHYLL A
lig 265
CLA
Z
612 38CHLOROPHYLL A
lig 266
CLA
Z
613 43CHLOROPHYLL A
lig 267
CLA
Z
614 44CHLOROPHYLL A
lig 268
XAT
Z
4622 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 269
LUT
Z
7620 42 CAROTENE-3,3'-DIOL
lig 270
LUT
Z
7621 42 CAROTENE-3,3'-DIOL
lig 271
NEX
Z
7623 44 DIOL
lig 272
LHG
Z
7630 231,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE