Analysis of Ligand-Protein Contacts in PDB entry:
6A4Y


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 23 ligands in PDB entry 6A4Y. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
HEM
A
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 5
NAG
A
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
IOD
A
607 1IODIDE ION
lig 9
IOD
A
608 1IODIDE ION
lig 10
IOD
A
609 1IODIDE ION
lig 11
IOD
A
610 1IODIDE ION
lig 12
CA
A
611 1CALCIUM ION
lig 13
SCN
A
612 3THIOCYANATE ION
lig 14
SCN
A
613 3THIOCYANATE ION
lig 15
SCN
A
614 3THIOCYANATE ION
lig 16
SCN
A
615 3THIOCYANATE ION
lig 17
SCN
A
616 3THIOCYANATE ION
lig 18
SCN
A
617 3THIOCYANATE ION
lig 19
SCN
A
618 3THIOCYANATE ION
lig 20
SCN
A
619 3THIOCYANATE ION
lig 21
IOD
A
620 1IODIDE ION
lig 22
IOD
A
621 1IODIDE ION
lig 23
OSM
A
622 41-(OXIDOSULFANYL)METHANAMINE