Analysis of Ligand-Protein Contacts in PDB entry:
6AGG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 9 ligands in PDB entry 6AGG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
Z
18 11PHOSPHOTHREONINE
lig 2
ZN
Z
501 1ZINC ION
lig 3
ACP
Z
502 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST
lig 4
AG2
Z
503 9AGMATINE
lig 5
ACT
Z
504 4ACETATE ION
lig 6
ACT
Z
505 4ACETATE ION
lig 7
NH4
Z
506 1AMMONIUM ION
lig 8
MG
Z
507 1MAGNESIUM ION
lig 9
MG
Z
508 1MAGNESIUM ION