Analysis of Ligand-Protein Contacts in PDB entry:
6B0J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 6B0J. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
G4S
D
1 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 2
DGS
D
2 143,6-ANHYDRO-2-O-SULFO-ALPHA-D-GALACTOPYRAN
lig 3
G4S
D
3 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 4
G4S
E
1 164-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 5
DGS
E
2 143,6-ANHYDRO-2-O-SULFO-ALPHA-D-GALACTOPYRAN
lig 6
G4S
F
1 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 7
DGS
F
2 143,6-ANHYDRO-2-O-SULFO-ALPHA-D-GALACTOPYRAN
lig 8
G4S
F
3 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 9
G4S
G
1 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 10
DGS
G
2 143,6-ANHYDRO-2-O-SULFO-ALPHA-D-GALACTOPYRAN
lig 11
G4S
G
3 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 12
G4S
H
1 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 13
DGS
H
2 143,6-ANHYDRO-2-O-SULFO-ALPHA-D-GALACTOPYRAN
lig 14
G4S
H
3 154-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 15
CA
A
501 1CALCIUM ION
lig 16
G4S
A
502 164-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 17
9RN
A
503 103,6-ANHYDRO-D-GALACTOSE
lig 18
9RN
A
507 103,6-ANHYDRO-D-GALACTOSE
lig 19
EDO
A
510 41,2-ETHANEDIOL
lig 20
TRS
A
511 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 21
ARG
A
512 12ARGININE
lig 22
CA
B
501 1CALCIUM ION
lig 23
G4S
B
502 164-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 24
9RN
B
503 103,6-ANHYDRO-D-GALACTOSE
lig 25
9RN
B
507 103,6-ANHYDRO-D-GALACTOSE
lig 26
9RN
B
508 113,6-ANHYDRO-D-GALACTOSE
lig 27
TRS
B
512 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 28
CA
C
501 1CALCIUM ION
lig 29
G4S
C
502 164-O-SULFO-BETA-D-GALACTOPYRANOSE
lig 30
9RN
C
503 103,6-ANHYDRO-D-GALACTOSE
lig 31
9RN
C
507 103,6-ANHYDRO-D-GALACTOSE
lig 32
EDO
C
508 41,2-ETHANEDIOL
lig 33
ARG
C
509 12ARGININE