Analysis of Ligand-Protein Contacts in PDB entry:
6BD2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 6BD2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
C
340 11PHOSPHOTHREONINE
lig 2
SEP
C
366 10PHOSPHOSERINE
lig 3
PEG
A
300 7DI(HYDROXYETHYL)ETHER
lig 4
1PE
B
300 16PENTAETHYLENE GLYCOL
lig 5
PG4
B
301 13TETRAETHYLENE GLYCOL
lig 6
PGE
B
302 10TRIETHYLENE GLYCOL
lig 7
EDO
B
303 41,2-ETHANEDIOL