Analysis of Ligand-Protein Contacts in PDB entry:
6BED


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 6BED. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FMT
A
601 3FORMIC ACID
lig 2
FMT
A
602 3FORMIC ACID
lig 3
FMT
A
603 3FORMIC ACID
lig 4
FMT
A
604 3FORMIC ACID
lig 5
FMT
A
605 3FORMIC ACID
lig 6
FMT
A
606 3FORMIC ACID
lig 7
FMT
A
607 3FORMIC ACID
lig 8
EDO
A
608 41,2-ETHANEDIOL
lig 9
EDO
A
609 41,2-ETHANEDIOL
lig 10
EDO
A
610 41,2-ETHANEDIOL
lig 11
EDO
A
611 41,2-ETHANEDIOL
lig 12
EDO
A
612 41,2-ETHANEDIOL
lig 13
EDO
A
613 41,2-ETHANEDIOL
lig 14
FMT
B
601 3FORMIC ACID
lig 15
FMT
B
602 3FORMIC ACID
lig 16
FMT
B
603 3FORMIC ACID
lig 17
EDO
B
604 41,2-ETHANEDIOL
lig 18
EDO
B
605 41,2-ETHANEDIOL
lig 19
RFP
C
601 59RIFAMPICIN
lig 20
FMT
C
602 3FORMIC ACID
lig 21
FMT
C
603 3FORMIC ACID
lig 22
FMT
C
604 3FORMIC ACID
lig 23
FMT
C
605 3FORMIC ACID
lig 24
FMT
C
606 3FORMIC ACID
lig 25
EDO
C
607 41,2-ETHANEDIOL
lig 26
EDO
C
608 41,2-ETHANEDIOL