Analysis of Ligand-Protein Contacts in PDB entry:
6D8A


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 6D8A. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MPD
A
801 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 2
MG
C
101 1MAGNESIUM ION
lig 3
MPD
G
101 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
F
801 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
F
802 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
ACT
F
803 4ACETATE ION
lig 7
MG
H
101 1MAGNESIUM ION
lig 8
MPD
J
101 8(4S)-2-METHYL-2,4-PENTANEDIOL