Analysis of Ligand-Protein Contacts in PDB entry:
6DT1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 6DT1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DOC
B
11 182',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
lig 2
DOC
F
11 182',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
lig 3
GOL
A
501 6GLYCEROL
lig 4
GOL
A
502 6GLYCEROL
lig 5
GOL
A
503 6GLYCEROL
lig 6
GOL
A
504 6GLYCEROL
lig 7
GOL
A
505 6GLYCEROL
lig 8
1PE
A
506 16PENTAETHYLENE GLYCOL
lig 9
GOL
A
507 6GLYCEROL
lig 10
GOL
A
508 6GLYCEROL
lig 11
GOL
A
509 6GLYCEROL
lig 12
GOL
A
510 6GLYCEROL
lig 13
GOL
A
511 6GLYCEROL
lig 14
DTT
A
512 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 15
DTT
A
513 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 16
GOL
A
514 6GLYCEROL
lig 17
GOL
A
515 6GLYCEROL
lig 18
CL
A
516 1CHLORIDE ION
lig 19
MG
A
517 1MAGNESIUM ION
lig 20
AMP
E
501 23ADENOSINE MONOPHOSPHATE
lig 21
CL
E
502 1CHLORIDE ION
lig 22
DTT
B
401 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 23
AMP
C
100 23ADENOSINE MONOPHOSPHATE
lig 24
DTT
D
401 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 25
DTT
D
402 82,3-DIHYDROXY-1,4-DITHIOBUTANE