Analysis of Ligand-Protein Contacts in PDB entry:
6GHM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 6GHM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
401 41,2-ETHANEDIOL
lig 2
EDO
A
402 41,2-ETHANEDIOL
lig 3
EDO
A
403 41,2-ETHANEDIOL
lig 4
EDO
A
404 41,2-ETHANEDIOL
lig 5
EDO
A
405 41,2-ETHANEDIOL
lig 6
EDO
A
406 41,2-ETHANEDIOL
lig 7
GOL
A
407 6GLYCEROL
lig 8
GOL
A
408 6GLYCEROL
lig 9
GOL
A
409 6GLYCEROL
lig 10
NHE
A
410 132-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
lig 11
NHE
A
411 132-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
lig 12
MN
A
412 1MANGANESE (II) ION
lig 13
MN
A
413 1MANGANESE (II) ION
lig 14
EDO
B
401 41,2-ETHANEDIOL
lig 15
EDO
B
402 41,2-ETHANEDIOL
lig 16
EDO
B
403 41,2-ETHANEDIOL
lig 17
EDO
B
404 41,2-ETHANEDIOL
lig 18
GOL
B
405 6GLYCEROL
lig 19
NHE
B
406 132-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
lig 20
NHE
B
407 132-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
lig 21
NHE
B
408 132-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
lig 22
MN
B
409 1MANGANESE (II) ION
lig 23
MN
B
410 1MANGANESE (II) ION
lig 24
EDO
D
1201 41,2-ETHANEDIOL
lig 25
EDO
D
1202 41,2-ETHANEDIOL
lig 26
NHE
D
1203 132-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID