Analysis of Ligand-Protein Contacts in PDB entry:
6JJM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 6JJM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BGC
E
1 12BETA-D-GLUCOPYRANOSE
lig 6
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 7
SIA
E
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
NAG
E
4 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BGC
H
1 12BETA-D-GLUCOPYRANOSE
lig 14
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 15
SIA
H
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 16
NAG
H
4 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
A
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
SO4
A
611 5SULFATE ION
lig 20
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
B
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
SO4
B
611 5SULFATE ION