Analysis of Ligand-Protein Contacts in PDB entry:
6MFM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 6MFM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPP
A
401 26THIAMINE DIPHOSPHATE
lig 2
MG
A
402 1MAGNESIUM ION
lig 3
MG
A
403 1MAGNESIUM ION
lig 4
MG
A
404 1MAGNESIUM ION
lig 5
MG
A
405 1MAGNESIUM ION
lig 6
ADP
A
406 27ADENOSINE-5'-DIPHOSPHATE
lig 7
NA
A
407 1SODIUM ION
lig 8
MG
A
408 1MAGNESIUM ION
lig 9
NA
A
409 1SODIUM ION
lig 10
ADP
B
401 27ADENOSINE-5'-DIPHOSPHATE
lig 11
NA
B
402 1SODIUM ION
lig 12
NA
B
403 1SODIUM ION
lig 13
TPP
B
404 26THIAMINE DIPHOSPHATE
lig 14
MG
B
405 1MAGNESIUM ION
lig 15
MG
B
406 1MAGNESIUM ION
lig 16
MG
B
407 1MAGNESIUM ION