Analysis of Ligand-Protein Contacts in PDB entry:
6MYP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 77 ligands in PDB entry 6MYP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MLZ
C
15 10N-METHYL-LYSINE
lig 2
FAD
A
1001 53FLAVIN-ADENINE DINUCLEOTIDE
lig 3
OAA
A
1002 9OXALOACETATE ION
lig 4
K
A
1003 1POTASSIUM ION
lig 5
MG
A
1004 1MAGNESIUM ION
lig 6
BCT
A
1005 4BICARBONATE ION
lig 7
PEG
A
1006 5DI(HYDROXYETHYL)ETHER
lig 8
UNL
A
1007 8UNKNOWN LIGAND
lig 9
UNL
A
1008 4UNKNOWN LIGAND
lig 10
UNL
A
1009 4UNKNOWN LIGAND
lig 11
UNL
A
1010 4UNKNOWN LIGAND
lig 12
UNL
A
1011 4UNKNOWN LIGAND
lig 13
UNL
A
1012 3UNKNOWN LIGAND
lig 14
UNL
A
1013 3UNKNOWN LIGAND
lig 15
UNL
A
1014 10UNKNOWN LIGAND
lig 16
UNL
A
1015 3UNKNOWN LIGAND
lig 17
UNL
A
1016 3UNKNOWN LIGAND
lig 18
UNL
A
1017 3UNKNOWN LIGAND
lig 19
UNL
A
1018 3UNKNOWN LIGAND
lig 20
UNL
A
1019 3UNKNOWN LIGAND
lig 21
UNL
A
1020 6UNKNOWN LIGAND
lig 22
UNL
A
1021 3UNKNOWN LIGAND
lig 23
UNL
A
1022 3UNKNOWN LIGAND
lig 24
UNL
A
1023 1UNKNOWN LIGAND
lig 25
UNL
A
1024 2UNKNOWN LIGAND
lig 26
UNL
A
1025 3UNKNOWN LIGAND
lig 27
UNL
A
1026 2UNKNOWN LIGAND
lig 28
UNL
A
1027 1UNKNOWN LIGAND
lig 29
UNL
A
1028 1UNKNOWN LIGAND
lig 30
UNL
A
1029 1UNKNOWN LIGAND
lig 31
UNL
A
1030 1UNKNOWN LIGAND
lig 32
UNL
A
1031 1UNKNOWN LIGAND
lig 33
UNL
A
1032 1UNKNOWN LIGAND
lig 34
FES
B
1001 4FE2/S2 (INORGANIC) CLUSTER
lig 35
SF4
B
1002 8IRON/SULFUR CLUSTER
lig 36
F3S
B
1003 7FE3-S4 CLUSTER
lig 37
UNL
B
1004 4UNKNOWN LIGAND
lig 38
UNL
B
1005 3UNKNOWN LIGAND
lig 39
UNL
B
1006 3UNKNOWN LIGAND
lig 40
UNL
B
1007 3UNKNOWN LIGAND
lig 41
UNL
B
1008 3UNKNOWN LIGAND
lig 42
UNL
B
1009 3UNKNOWN LIGAND
lig 43
UNL
B
1010 3UNKNOWN LIGAND
lig 44
UNL
B
1011 3UNKNOWN LIGAND
lig 45
UNL
B
1012 3UNKNOWN LIGAND
lig 46
UNL
B
1013 3UNKNOWN LIGAND
lig 47
UNL
B
1014 3UNKNOWN LIGAND
lig 48
UNL
B
1015 3UNKNOWN LIGAND
lig 49
UNL
B
1016 3UNKNOWN LIGAND
lig 50
UNL
B
1017 2UNKNOWN LIGAND
lig 51
UNL
B
1018 1UNKNOWN LIGAND
lig 52
TTF
C
202 144,4,4-TRIFLUORO-1-THIEN-2-YLBUTANE-1,3-DIO
lig 53
HEM
C
201 41PROTOPORPHYRIN IX CONTAINING FE
lig 54
UMQ
C
203 34UNDECYL-MALTOSIDE
lig 55
UNL
C
204 4UNKNOWN LIGAND
lig 56
UNL
C
205 4UNKNOWN LIGAND
lig 57
UNL
C
206 23UNKNOWN LIGAND
lig 58
UNL
C
207 12UNKNOWN LIGAND
lig 59
UNL
C
208 3UNKNOWN LIGAND
lig 60
UNL
C
209 1UNKNOWN LIGAND
lig 61
UNL
C
210 2UNKNOWN LIGAND
lig 62
UNL
C
211 3UNKNOWN LIGAND
lig 63
3PE
D
201 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 64
UNL
D
202 11UNKNOWN LIGAND
lig 65
UNL
D
203 3UNKNOWN LIGAND
lig 66
UNL
D
204 3UNKNOWN LIGAND
lig 67
UNL
D
205 3UNKNOWN LIGAND
lig 68
UNL
D
206 3UNKNOWN LIGAND
lig 69
UNL
D
207 3UNKNOWN LIGAND
lig 70
UNL
D
208 4UNKNOWN LIGAND
lig 71
UNL
D
209 5UNKNOWN LIGAND
lig 72
UNL
D
210 13UNKNOWN LIGAND
lig 73
UNL
D
211 10UNKNOWN LIGAND
lig 74
UNL
D
212 10UNKNOWN LIGAND
lig 75
UNL
D
213 1UNKNOWN LIGAND
lig 76
UNL
D
214 1UNKNOWN LIGAND
lig 77
UNL
D
215 1UNKNOWN LIGAND