Analysis of Ligand-Protein Contacts in PDB entry:
6OF5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 96 ligands in PDB entry 6OF5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
E
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 7
FUC
F
4 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 13
FUC
G
6 10ALPHA-L-FUCOPYRANOSE
lig 14
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
FUC
H
2 10ALPHA-L-FUCOPYRANOSE
lig 16
NAG
H
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 20
FUC
I
4 10ALPHA-L-FUCOPYRANOSE
lig 21
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 24
FUC
J
4 10ALPHA-L-FUCOPYRANOSE
lig 25
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
FUC
K
2 10ALPHA-L-FUCOPYRANOSE
lig 27
NAG
K
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
FUC
L
2 10ALPHA-L-FUCOPYRANOSE
lig 30
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
FUC
M
2 10ALPHA-L-FUCOPYRANOSE
lig 32
NAG
M
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 36
FUC
N
4 10ALPHA-L-FUCOPYRANOSE
lig 37
ZN
A
501 1ZINC ION
lig 38
FE
A
502 1FE (III) ION
lig 39
NAG
A
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
SO4
A
517 5SULFATE ION
lig 41
SO4
A
518 5SULFATE ION
lig 42
SO4
A
519 5SULFATE ION
lig 43
SO4
A
520 5SULFATE ION
lig 44
NA
A
521 1SODIUM ION
lig 45
NA
A
522 1SODIUM ION
lig 46
EDO
A
523 41,2-ETHANEDIOL
lig 47
EDO
A
524 41,2-ETHANEDIOL
lig 48
EDO
A
525 41,2-ETHANEDIOL
lig 49
PGE
A
526 7TRIETHYLENE GLYCOL
lig 50
PGE
A
527 10TRIETHYLENE GLYCOL
lig 51
MFJ
A
528 28 YL]OXY}(NAPHTHALEN-1-YL)METHYL]PHOSPHONIC
lig 52
ZN
B
501 1ZINC ION
lig 53
FE
B
502 1FE (III) ION
lig 54
NAG
B
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
SO4
B
515 5SULFATE ION
lig 56
SO4
B
516 5SULFATE ION
lig 57
SO4
B
517 5SULFATE ION
lig 58
SO4
B
518 5SULFATE ION
lig 59
SO4
B
519 5SULFATE ION
lig 60
SO4
B
520 5SULFATE ION
lig 61
SO4
B
521 5SULFATE ION
lig 62
SO4
B
522 5SULFATE ION
lig 63
EDO
B
523 41,2-ETHANEDIOL
lig 64
EDO
B
524 41,2-ETHANEDIOL
lig 65
ZN
D
501 1ZINC ION
lig 66
FE
D
502 1FE (III) ION
lig 67
NAG
D
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
EDO
D
504 41,2-ETHANEDIOL
lig 69
NAG
D
510 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
SO4
D
511 5SULFATE ION
lig 71
SO4
D
512 5SULFATE ION
lig 72
SO4
D
513 5SULFATE ION
lig 73
NA
D
514 1SODIUM ION
lig 74
EDO
D
515 41,2-ETHANEDIOL
lig 75
EDO
D
516 41,2-ETHANEDIOL
lig 76
EDO
D
517 41,2-ETHANEDIOL
lig 77
GOL
D
518 6GLYCEROL
lig 78
PGE
D
519 7TRIETHYLENE GLYCOL
lig 79
PGE
D
520 4TRIETHYLENE GLYCOL
lig 80
PGE
D
521 10TRIETHYLENE GLYCOL
lig 81
ZN
C
501 1ZINC ION
lig 82
FE
C
502 1FE (III) ION
lig 83
NAG
C
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
NAG
C
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 85
SO4
C
512 5SULFATE ION
lig 86
SO4
C
513 5SULFATE ION
lig 87
SO4
C
514 5SULFATE ION
lig 88
SO4
C
515 5SULFATE ION
lig 89
NA
C
516 1SODIUM ION
lig 90
NA
C
517 1SODIUM ION
lig 91
EDO
C
518 41,2-ETHANEDIOL
lig 92
EDO
C
519 41,2-ETHANEDIOL
lig 93
EDO
C
520 41,2-ETHANEDIOL
lig 94
EDO
C
521 41,2-ETHANEDIOL
lig 95
EDO
C
522 41,2-ETHANEDIOL
lig 96
NAG
C
523 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE