Analysis of Ligand-Protein Contacts in PDB entry:
6PDT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 6PDT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLC
A
601 12ALPHA-D-GLUCOPYRANOSE
lig 2
MG
A
602 1MAGNESIUM ION
lig 3
ATP
A
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 4
GLC
B
601 12ALPHA-D-GLUCOPYRANOSE
lig 5
MG
B
602 1MAGNESIUM ION
lig 6
ATP
B
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 7
GLC
C
601 12ALPHA-D-GLUCOPYRANOSE
lig 8
MG
C
602 1MAGNESIUM ION
lig 9
ATP
C
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 10
GLC
D
601 12ALPHA-D-GLUCOPYRANOSE
lig 11
MG
D
602 1MAGNESIUM ION
lig 12
ATP
D
603 31ADENOSINE-5'-TRIPHOSPHATE