Analysis of Ligand-Protein Contacts in PDB entry:
6PFG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 6PFG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NDP
A
601 48 PHOSPHATE
lig 2
UFP
A
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 3
OFJ
A
603 33 CARBAMOYLBENZOIC ACID
lig 4
MTX
A
604 33METHOTREXATE
lig 5
SO4
A
605 5SULFATE ION
lig 6
NDP
B
601 48 PHOSPHATE
lig 7
UFP
B
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 8
OFJ
B
603 33 CARBAMOYLBENZOIC ACID
lig 9
MTX
B
604 33METHOTREXATE
lig 10
SO4
B
605 5SULFATE ION
lig 11
NDP
C
601 48 PHOSPHATE
lig 12
UFP
C
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 13
OFJ
C
603 33 CARBAMOYLBENZOIC ACID
lig 14
MTX
C
604 33METHOTREXATE
lig 15
SO4
C
605 5SULFATE ION
lig 16
NDP
D
601 48 PHOSPHATE
lig 17
UFP
D
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 18
OFJ
D
603 33 CARBAMOYLBENZOIC ACID
lig 19
MTX
D
604 33METHOTREXATE
lig 20
SO4
D
605 5SULFATE ION
lig 21
NDP
E
601 48 PHOSPHATE
lig 22
UFP
E
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 23
OFJ
E
603 33 CARBAMOYLBENZOIC ACID
lig 24
MTX
E
604 33METHOTREXATE
lig 25
SO4
E
605 5SULFATE ION
lig 26
SO4
E
606 5SULFATE ION