Analysis of Ligand-Protein Contacts in PDB entry:
6RFC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 6RFC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
301 1SODIUM ION
lig 2
LFA
A
302 16EICOSANE
lig 3
LFA
A
303 9EICOSANE
lig 4
LFA
A
304 6EICOSANE
lig 5
LFA
A
305 5EICOSANE
lig 6
LFA
A
306 13EICOSANE
lig 7
LFA
A
307 8EICOSANE
lig 8
LFA
A
308 8EICOSANE
lig 9
LFA
A
309 12EICOSANE
lig 10
LFA
A
310 10EICOSANE
lig 11
LFA
A
311 5EICOSANE
lig 12
LFA
A
312 5EICOSANE
lig 13
LFA
A
313 11EICOSANE
lig 14
LFA
A
314 12EICOSANE
lig 15
LFA
A
315 10EICOSANE
lig 16
LFA
A
316 6EICOSANE
lig 17
LFA
A
317 5EICOSANE
lig 18
LFA
A
318 6EICOSANE
lig 19
LFA
A
319 6EICOSANE
lig 20
LFA
A
320 10EICOSANE
lig 21
LFA
A
321 7EICOSANE
lig 22
LFA
A
322 5EICOSANE
lig 23
LFA
A
323 11EICOSANE
lig 24
LFA
A
324 4EICOSANE
lig 25
LFA
A
325 5EICOSANE
lig 26
LFA
A
326 10EICOSANE
lig 27
LFA
A
327 12EICOSANE
lig 28
OLC
A
328 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 29
OLC
A
329 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 30
OLC
A
330 12(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 31
GOL
A
331 6GLYCEROL
lig 32
GOL
A
332 6GLYCEROL
lig 33
GOL
A
333 6GLYCEROL
lig 34
LFA
A
334 14EICOSANE
lig 35
LFA
A
335 18EICOSANE
lig 36
LFA
A
336 8EICOSANE
lig 37
RET
A
337 20RETINAL