Analysis of Ligand-Protein Contacts in PDB entry:
6RFR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 49 ligands in PDB entry 6RFR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SF4
A
801 8IRON/SULFUR CLUSTER
lig 2
SF4
A
802 8IRON/SULFUR CLUSTER
lig 3
FES
A
803 4FE2/S2 (INORGANIC) CLUSTER
lig 4
SF4
B
501 8IRON/SULFUR CLUSTER
lig 5
FMN
B
502 31FLAVIN MONONUCLEOTIDE
lig 6
3PE
C
501 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 7
NDP
E
401 48 PHOSPHATE
lig 8
3PE
E
402 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 9
CDL
E
403 72CARDIOLIPIN
lig 10
FES
H
301 4FE2/S2 (INORGANIC) CLUSTER
lig 11
SF4
I
301 8IRON/SULFUR CLUSTER
lig 12
SF4
I
302 8IRON/SULFUR CLUSTER
lig 13
3PE
J
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
LMN
J
202 69LAURYL MALTOSE NEOPENTYL GLYCOL
lig 15
3PE
J
203 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 16
SF4
K
301 8IRON/SULFUR CLUSTER
lig 17
PLC
K
302 39DIUNDECYL PHOSPHATIDYL CHOLINE
lig 18
ZN
M
201 1ZINC ION
lig 19
ZMP
O
201 33 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 20
ZMP
Q
201 33 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 21
PLC
W
401 41DIUNDECYL PHOSPHATIDYL CHOLINE
lig 22
PLC
W
402 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 23
PLC
W
403 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 24
3PE
W
404 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
CDL
X
201 86CARDIOLIPIN
lig 26
CDL
Z
201 76CARDIOLIPIN
lig 27
3PE
b
201 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 28
CDL
g
201 83CARDIOLIPIN
lig 29
3PE
g
202 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
LMN
j
101 65LAURYL MALTOSE NEOPENTYL GLYCOL
lig 31
CDL
j
102 78CARDIOLIPIN
lig 32
PLC
n
1101 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 33
UQ9
1
501 35UBIQUINONE-9
lig 34
PLC
1
502 35DIUNDECYL PHOSPHATIDYL CHOLINE
lig 35
3PE
1
503 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
3PE
1
504 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
T7X
2
501 48PHOSPHATIDYLINOSITOL
lig 38
CPL
2
502 521-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSP
lig 39
T7X
2
503 52PHOSPHATIDYLINOSITOL
lig 40
T7X
3
201 49PHOSPHATIDYLINOSITOL
lig 41
3PE
4
501 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
3PE
4
502 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
CDL
4
503 92CARDIOLIPIN
lig 44
3PE
4
504 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
3PE
4
505 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
T7X
5
801 43PHOSPHATIDYLINOSITOL
lig 47
3PE
5
802 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
PLC
5
803 31DIUNDECYL PHOSPHATIDYL CHOLINE
lig 49
3PE
5
804 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI